SE2020008

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5210
  • Medicago truncatula
  • SE2020008
  • Mutator
  • M7
  • MtChr3:39936275-39936467
  • TAATTTTTT
  • GG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATTTTTT  AAAA                                -CATA     GTAGCAACTTTTGCATTGGAAATTGTACGGTTATGACTTT
         GG    TGTTAACAAGTGCCTTAAGGGCATTGTTTAAG     TAAAA                                        
         ||    ||||||||||||||||||||||||||||||||     |||||                                         
         CC    ACAATTGTTCACGGGATTCCCGTAACAAATTC     GTGTT                                        
TTTTTTAAT  CAGA                                CTTGG     TTTCTTTAATACAGAACTTTTATGTTCAGTTTGTAAACAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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