SE2020034

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5236
  • Medicago truncatula
  • SE2020034
  • Mutator
  • M16
  • MtChr4:32603478-32603675
  • TTAAATTAA
  • TAAATTAAGGGTAATGCTAACTTGTATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
T   A            C      GT    TAAAACA  A   AAT    C   T       TG -GTTA     ATA       -      TAATCTTTA
 TAA TTAAGGGTAATG TAACTT  ATTT       CA GTT   AAAT AAA ATATGAA  A     TTGAA   TGTGCAT TAAATT         
 ||| |||||||||||| ||||||  ||||       || |||   |||| ||| |||||||  |     |||||   ||||||| ||||||         A
 ATT AATTCCCATTAC ATTGAA  TGAA       GT CAA   TTTA TTT TATACTT  T     AATTT   ATACGTA GTTTAG         
A   A            A      AT    ---CACG  A   ATT    T   T       TA AAGAG     AAA       A      TAACTTTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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