SE2010038

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5240
  • Medicago truncatula
  • SE2010038
  • Tc1/Mariner
  • St5
  • MtChr8:6562698-6562848
  • TA
  • TACTCCCTCCGGTCTTTATTATAAGAAATAATTGATTTTTTAAATTCATTGGGTAAGTGATGTATCTAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
        CC  T                                 C         G          A  CTATA
TACTCCCT  GG CTTTATTATAAGAAATAATTGATTTTTTAAATT ATTGGGTAA TGATGTATCT GT     
||||||||  || ||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||     T
ATGGGGGA  CC GGAATAATATTCTTTGTTAACTGAAAAATTTAA TAACTTATT ATTACATAGA CA     
        AA  C                                 A         G          G  TTATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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