SE2020046

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5248
  • Medicago truncatula
  • SE2020046
  • Mutator
  • M20
  • MtChr8:4520908-4521306
  • CTCTATTCC
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
CTCTATTCCAACACAAG   - CAATCTGTAAAACAAAGAAAAACAAATTAACAAACAAAAATGAATAAACCACCAAATTAGTTCCTAACTTTGCAGGACGCTCTGAAATAAATCCCTGACACGATGTACATCTCAGAAAGGTCTCTGACCCTATTAAACCGTTAAGTTAGTCCTTAAATTTCATCACTTACTATCAAATAGAT
                 TAC A                                                                                                                                                                                      
                 ||| |                                                                                                                                                                                       
                 ACT A                                                                                                                                                                                      
        TAAAAACAA   C TTTGGTGGTTTAAGCAGGGAATGTTAGTTTATTCATGGACGGTAATACTTATAAAGCTTTTCCAGAGACTAAAACAGTTTAAAATGAGTATAATCAGTAAGATTGTTGTACCATTACTGTTTTAACTATCATTCACCAATTTATACCCTTAGTTTAACTAGCATACAACAATTTTATATTCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End
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