SE2020073

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5275
  • Medicago truncatula
  • SE2020073
  • Mutator
  • M10
  • MtChr5:40293829-40294045
  • CATTATCTA
  • GGGTTAGGATCCTCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
CATTATCTA    T           ----CA      TGCTTCTCCATTTCTTTAATTTGGAGAGATAAAAGCACATAAAATCTTGAAAAAAGTAAAATATAATTAATGATG
         GGGT AGGATCCTCTC      TTTATG                                                                           
         |||| |||||||||||      ||||||                                                                           G
         CCCA TTCTAGGAGAG      CGTTTT                                                                           
    ATTAC    C           ATAAAC      ATTTATTTCAAAACGTTCAACCTCTTTCTATCTGTGTTTTTTATATACCACCCAGGATGGTGATTCACCCAGGGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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