SE2020100

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5302
  • Medicago truncatula
  • SE2020100
  • Mutator
  • M10
  • MtChr8:27119642-27119806
  • ATCCTCTCC
  • ATCCTCTCCATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                         ATAAAAATAAATAGAAGAA  A                    TTATAA  GTCCTACCATTAAGTGGGTCCAACT
            ATCCTCTCCATTT                   GC ATTTGGAGAGATAGAGATAT      TG                         
            |||||||||||||                   || ||||||||||||||||||||      ||                          
            TGGGAGAGGTAAA                   TG TAAACCTCTCTATTTCTGTG      TG                         
AAGCTTCAATTC             -----------------GA  G                    ------  TTTTTTCATTTTTCATTAATTACTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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