SE2030163

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5365
  • Medicago truncatula
  • SE2030163
  • hAT
  • Hat2
  • MtChr5:39194358-39194536
  • TCAGTATG
  • GTATGCTATGAAGCACGGATAC

Secondary structure and sequence

TSD    TIR
5'



3' 
TCA    --                  G   ACTGACACGCTGACACAGCTAATAATTTGAAAAAATCACATAATTCAGTGTAATTACAAG
   GTAT  GCTATGAAGCACGGATAC GAC                                                            
   ||||  |||||||||||||||||| |||                                                            T
   TATG  TGATACTTCGTGCCTGTG GGA                                                            
  G    AC                  A   GCCTAATCCGCACAGAGCCACAGCCTATGTACAGCACAGGCTGTGGCTGTGCTGTGACTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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