Plant MITE

SE2010180

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_5382
Medicago truncatula
SE2010180
Tc1/Mariner
St1
MtChr2:7945577-7945727
TA
TACTCCCTCCGGTCTTATTTACAAGAAACAATTGACTTTTTAGATTCATTGAGTAATTGATGTATCTAGTCTA

Secondary structure and sequence

TSD TIR

5'

3'

                              A          A  T                    CTA     AA
TACTCCCTCCGGTCTTATTTACAAGAAACA TTGACTTTTT GA TCATTGAGTAATTGATGTAT   GTCTA  
|||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||   |||||  A
ATGAGGGAGGCCAGGATAAATGTTCTTTGT AACTGAAAAA CT AGTAATTTATTAACTACATA   CAGAT  
                              A          A  C                    AAC     AT

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2010180

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2010180