SE2020189

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5391
  • Medicago truncatula
  • SE2020189
  • Mutator
  • M10
  • MtChr5:31626969-31627190
  • CAATTTTTA
  • GGGTGAAGATCCTCTCCATTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
CAATTTTTAA    GAA               GCAAAATAAATGGAG     TAAG         GAT      CA     ----------A   GGTGGGTCCTACCACTAAGTGG
          GGGT   GATCCTCTCCATTTG               TTTTA    TTGGAGAGA   AGACAC  AAAAT           GAT                      
          ||||   |||||||||||||||               |||||    |||||||||   ||||||  |||||           |||                      G
          CCCA   CTAGGAGAGGTAAAT               GAAGT    AACCTCTCT   TCTGTG  TTTTA           ATT                      
 AATTTTTAA    ATC               ATACAAAGAGGTAAA     --TA         ATT      TA     AAACTTTTTTC   TTATATTAATTACTACCACCCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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