SE2020194

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5396
  • Medicago truncatula
  • SE2020194
  • Mutator
  • M18
  • MtChr7:17415447-17415693
  • CCACTCCAA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
CCACTCCAAC      A   CAAATCTCACACAAGGTACTTATAAAAAAGAGGAATGCTAGCAACACTCACTTTTGAGCACTCTCTCTAACACTCACCCTCTCATTGGATAAAATCAATGTATGT
          ATCTTG TGA                                                                                                         
          |||||| |||                                                                                                          
          TCTCCT TAC                                                                                                         
  AAAAAATA      -   GATCGTTGTGAGAGAAAACTCGTGAGAGAGATTGTGAGTGAGAGAATAACCAAATTTAGTAACACCCAGATGTGAAATTTTTAACTTGGGTGTGTTTCACCACCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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