SE2030196

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5398
  • Medicago truncatula
  • SE2030196
  • hAT
  • Hat9
  • MtChr6:19960576-19960755
  • ATTGACGG
  • CGGCTATGAAGCACGGACAC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTGA   -                 -  GACACGACACGGACAATGACACGCCGACACAACTAATAATTTGAAAAAATCACATAATTCAG
     CGG CTATGAAGCACGGACAC CG                                                              
     ||| ||||||||||||||||| ||                                                              T
     GTT GATACTTCGTGCCTGTG GG                                                              
 GGCA   A                 A  AGCCTAATCCACACAGGGCCACAGTCTGTGCACAGCACAGGCTGTGGCTGTGAACATTAATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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