SE2030223

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5425
  • Medicago truncatula
  • SE2030223
  • hAT
  • Hat10
  • MtChr4:23881430-23881586
  • GATACAAG
  • ATGAAGCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
GATACAAGCA         AGATA   A   - G  ACTGACACGCCGACACAGCTAATAATTTGAAAAAAATGACATAATT
          ATGAAGCAC     CGG CAC G AC                                              
          |||||||||     ||| ||| | ||                                              C
          TACTTCGTG     CCT GTG G GA                                              
GAACATAGGA         -----   -   A -  GCCTAATCTGCACAGGGCCGTGCTGTGGCTGTGAACATTAATGTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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