SE2020226

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5428
  • Medicago truncatula
  • SE2020226
  • Mutator
  • M76
  • MtChr5:30869639-30869836
  • ATATATAAA
  • TATATAAAGGGAAATGCTAACC

Secondary structure and sequence

TSD    TIR
5'



3' 
  A      AA   AAA          GGCACCGGTTAAGGATAATAAAAAGGGAAATTATATGTTAATTATTGCATTGAAAATTGTTTAATTAATCTAT
   TATATA  GGG   TGCTAACCGG                                                                         
   ||||||  |||   ||||||||||                                                                         A
   ATATAT  CCC   ACGATTGGCC                                                                         
AAA      -A   AGA          ACAGGGACCCCGTGACCAATTCGTATGTTTTTTTCCTTTAAGAATGGTATTTTCCTTCAAAACAACTGAATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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