SE2010234

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5436
  • Medicago truncatula
  • SE2010234
  • Tc1/Mariner
  • St19
  • MtChr5:37998641-37998914
  • TA
  • TACTACCTCTGTTTCTTTTTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
    A                 ---     A ATTTTAACATTTTACACAAACCAAAATAGTCAATGATTGTTACTACTTTTGATGTAATAAGTTGTACTTTTACTATAATGACCTCATTTAATATCTCATTTCATATA
TACT CCTCTGTTTCTTTTTAA   TTGTT C                                                                                                           
|||| |||||||||||||||||   ||||| |                                                                                                            
ATGA GGAGGCAAGGAAAAATT   AGAGA A                                                                                                           
    G                 CAC     - AACTTCTTTAAAAAACAAGTATAAATTGACAGTGAAAGTTTTAAGTTACGTTGTAATTTATAATAAAATGGTTATAATAGGAATTGATAAATAACGCCTCTCTCTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3