SE2020241

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5443
  • Medicago truncatula
  • SE2020241
  • Mutator
  • M83
  • MtChr4:30512976-30513162
  • ATAAATAAA
  • GGGTCTTGT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATAAATAAA   TCT   -     ---  -    TCCGGAGCACTAGTTAAGGAACCAAAAGTAGAAAGAAAAATTAAGTTTTGTATTGAAAAAAC
         GGG   TGT TAATT   AG TGTC                                                              
         |||   ||| |||||   || ||||                                                               
         CCC   ACA TTGGT   CA TTTC                                                              
AAATAAATA   TTT   A     GAC  A    TTAATATTTTCTTTTAAAACAAAACCTTTAACATATAAGATGAAAAACTTTTTATTTTTCCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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