SE2010263

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5465
  • Medicago truncatula
  • SE2010263
  • Tc1/Mariner
  • St23
  • MtChr4:41427876-41428183
  • TA
  • TACTCCCTCCGGTCTCGAATGTAAGAAACAAAACAAAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
               C                 C     AATTGTTG   T  A    A      A  ATACAAA       C  TT        CTA    AATTTTAATCTCATTTACTTTATCCAATTT   TC    TCCCATGTTTAACGCATTCCAAATATTTTT
TACTCCCTCCGGTCT GAATGTAAGAAACAAAA AAAAA        GTC CA ATGT AGGAAA GT       AGTCATT TA  AAATGTTA   TTCC                              GTT  ACAT                              
||||||||||||||| ||||||||||||||||| |||||        ||| || |||| |||||| ||       ||||||| ||  ||||||||   ||||                              |||  ||||                              C
ATGAGGGAGGCCAGA CTTACATTCTTTGTTTT TTTTT        TAG GT TATA TTCTTT CA       TCAGTAA AT  TTTATGGT   AAGG                              CGG  ACAG                              
               A                 -     --------   T  G    A      -  -CCTAAC       C  TT        AAA    ------------------------ACAATA   GA    AACCTTTGTACTGAAAACTTGAGGTTGTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3