SE2020270

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5472
  • Medicago truncatula
  • SE2020270
  • Mutator
  • M11
  • MtChr5:31074289-31074482
  • AAAAAAATA
  • TGGGTCTTGTTAACGAGTGCCCCCGGGGCACTCTTTAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAAAAATA    TCT                                CATTCCAAAA   GAAACTATTCCATAAAAAAAGTCAAATGTTTCAATTTCCAA
         TGGG   TGTTAACGAGTGCCCCCGGGGCACTCTTTAAG          GGA                                         
         ||||   ||||||||||||||||||||||||||||||||          |||                                         T
         ACCC   ACAATTGCTCACGGGGGCCCCGTGAGAAATTC          TGG                                         
 TATAAAAA    TTT                                ----------   AAATTTTCCATTGAAAAAAACTTTAAAAAACATTAGTTACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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