SE2020277

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5479
  • Medicago truncatula
  • SE2020277
  • Mutator
  • M89
  • AC146568:14781-14978
  • CCACCTCAT
  • TGGGATACCACTTGTGTACTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
CCACCTCA       C              TAAGGTAGC               C GT              -    TACCAATGTTACTTTATAGATGCTTTA
        TGGGATA CACTTGTGTACTAT         AATGGTATATACCAT G  CAATTAGAGTGTGC CATC                           
        ||||||| ||||||||||||||         ||||||||||||||| |  |||||||||||||| ||||                           T
        ACCCTAT GTGAACACATGGTA         TTACCATATATGGTA C  GTTAATCTTACACG TACA                           
 GTACTCC       C              ---------               A AG              A    CCGTGTGGGAAATTTTTATATATAGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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