SE2020330

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5532
  • Medicago truncatula
  • SE2020330
  • Mutator
  • M26
  • MtChr7:5643792-5644076
  • ATACAAAAA
  • GAGAAATTCTTGTGTAGGAACGAACCTAACTATCATTCTTACAAACAACAAATTAAAACATAACACGT

Secondary structure and sequence

TSD    TIR
5'



3' 
 ATACAAAAA                              -       C                       A      ------A       -  TTCTTTTAACCATGATTGGTGGTGGTGAATACTAAGTGCAAATAATGGTTG
          GAGAAATTCTTGTGTAGGAACGAACCTAAC TATCATT TTACAAACAACAAATTAAAACAT ACACGT       TTTTTTT TT                                                   
          |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||       ||||||| ||                                                    
          CTCTTTAAGAACACATCCTTGCTTGGATTG ATAGTAA AATGTTTGTTGTTTAATTTTGTA TGTGCA       AATAAAA TT                                                   
AAAAAACATA                              T       A                       C      GTAACAA       T  TATTAATCTTTTATTAAATTCTTTACTTTTTATTGACGAGGAGGAGAAAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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