SE2020360

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5562
  • Medicago truncatula
  • SE2020360
  • Mutator
  • M11
  • MtChr4:25607301-25607492
  • TTATATTAA
  • TAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATAT     GAAA       T     GTC    A   CC      -ACC      --T  TATTTTTTTTTTTTAAATTTATGTAATCAATGCATC
      TAAGG    TGTTAAC AGTGC   CAGG CAC  TTTAAG    TTTAAA   AG                                    
      |||||    ||||||| |||||   |||| |||  ||||||    ||||||   ||                                     
      ATTCC    ACAATTG TCACG   GTCC GTG  AGATTC    AGTTTT   CT                                    
AATTAT     -AAA       C     AAA    C   AA      GTAA      CTT  TTAATAAAATATTTTTTCATTTTATAAAGTTAAAGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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