SE2020370

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5572
  • Medicago truncatula
  • SE2020370
  • Mutator
  • M33
  • MtChr4:7199106-7199309
  • TAAAAATAA
  • AGGGTCATGTTAACTTGTGTCTTTAGGGCACATGTTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAAATA    TC                                ACATTATTTTC      A      TAAAAATTTGA      --AA      ATTAAACATT
        AGGG  ATGTTAACTTGTGTCTTTAGGGCACATGTTAA           ATTTCA TAATGG           TGAAAA    GTTAAT          
        ||||  ||||||||||||||||||||||||||||||||           |||||| ||||||           ||||||    ||||||          T
        TCCC  TACAATTGAACACAGGAATCCCGTGTATAATT           TAAGGT ATTATC           ACTTTT    CAATTA          
AATAAAAA    TT                                ---------CT      G      TTTAATACATA      AACA      AATAACGAGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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