SE2020380

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5582
  • Medicago truncatula
  • SE2020380
  • Mutator
  • M2
  • MtChr3:31470127-31470329
  • TTTTTAAAA
  • TTTTAAAAGAGAAATGATATTTGAACGATCACTTTTTGACAACTTTTGTGATAA

Secondary structure and sequence

TSD    TIR
5'



3' 
T   T       A                   C    --           GT     TTTTCTCTCTCATACT    TT T  TTTTACTTTCTCTCTCTATTGTTTTGATT
 TTT AAAAGAG AATGATATTTGAACGATCA TTTT  TGACAACTTTT  GATAA                CACA  A TC                             
 ||| ||||||| ||||||||||||||||||| ||||  |||||||||||  |||||                ||||  | ||                              
 AAA TTTTCTC TTACTATAAACTTGTTAGT AAGA  ACTGTTGGAAA  CTGTT                GATT  T AA                             
A   T       G                   A    AC           AC     ----------------    -- -  TATGTTTCTTTAAATCCATAAACGTGTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3