SE2020389

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5591
  • Medicago truncatula
  • SE2020389
  • Mutator
  • M66
  • MtChr8:28321487-28321666
  • TTTAGGTTA
  • AGGCTTAATTGCACTTTTGGACCCCTATCTTTCAAAAAGTTGCGGTTATGGCCCCCTAACTAATTTAAATACAAAACA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTAGGTT                                 AA                                           TAGG
        AGGCTTAATTGCACTTTTGGACCCCTATCTTTC  AAAGTTGCGGTTATGGCCCCCTAACTAATTTAAATACAAAACA    
        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||     
        TCCGAATTAACGTGAAAATCTGGGGATAGAAAG  TTTCAACGCCAATACTGGGGGATTGATTAAATTTATGTTTTGT    
ATTGGATT                                 GC                                           CGGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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