SE2010391

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5593
  • Medicago truncatula
  • SE2010391
  • Tc1/Mariner
  • St30
  • MtChr5:29296224-29296501
  • TA
  • TACTCCCTCCATTCCTTTTCTTTTGATGTTTTAG

Secondary structure and sequence

TSD    TIR
5'



3' 
              C                   -        ACAAGTTTTAAGGAGTAATTAAAGTATATAAACATTTGTGTGTTTTTTACTTAAATGTCCTTATTTATCATTAAATTCACATGTGATAAACCAAAG
TACTCCCTCCATTC TTTTCTTTTGATGTTTTAG CTCTTGAC                                                                                                
|||||||||||||| ||||||||||||||||||| ||||||||                                                                                                G
ATGAGGGAGGTAAG AAAAGAAAACTACAAAATC TGAAGTTG                                                                                                
              A                   T        ATATAAGGTTTTGTAAACTACAAAATCACTTAAATAATAACAAAAGAGTTCAAATGGGAACAACCTTTTGTGTTATTTGATAATTTCATCAACACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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