SE2020413

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5615
  • Medicago truncatula
  • SE2020413
  • Mutator
  • M46
  • MtChr1:6052648-6052848
  • TAATTAAAT
  • TAATTAAATGGGTTTGTCTAACATGTGCAACATTGCACATGTTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
         AAT      G    A         CA             AACA    ATAGTAGTAACTTTTTCTTGGAAAATTATAATTATTTATTTAAAAGTTT
   TAATTA   GGGTTT TCTA CATGTGCAA  TTGCACATGTTAA    ACTA                                                 
   ||||||   |||||| |||| |||||||||  |||||||||||||    ||||                                                  
   ATTAAT   CCCAAA AGAT GTACACGTT  AACGTGTACAATT    TTCA                                                 
TAA      ---      A    A         TA             ---C    AATTTTATCTTTAAAATATAACCTTGAACATGTAAATTATAATTTATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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