SE2010419

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5621
  • Medicago truncatula
  • SE2010419
  • Tc1/Mariner
  • St14
  • MtChr7:22914830-22915082
  • TA
  • TACTACCTCCGTCCCTAATTATAGGACCCTTTTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
                                   ----------     TAACGGGAATTAAGATAGTGCATATTTGTATTAAATATGTTTGTAATTACTATTGTTTTTACAATTTTATCCTTTAAGAGA
TACTACCTCCGTCCCTAATTATAGGACCCTTTTGA          AAAAA                                                                                 
|||||||||||||||||||||||||||||||||||          |||||                                                                                 G
ATGATGGAGGCAGGGATTAATATTCTGGGAAAACT          CAGGG                                                                                 
                                   CTAAAAAAAA     AAAAATATTCTGGGGAAACGATAAAGGTTGATGTAATTAATAAAGAAATGTATGTACAGAGATAAATGTATTTGGTTGGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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