SE2050425

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5627
  • Medicago truncatula
  • SE2050425
  • PIF/harbinger
  • To4
  • AC147501:79465-79681
  • TAA
  • AGGGCCTGTTTGGATTGACTTATTTTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   G              -      TT   -  GCATGTAAAACAGCTTATGCATATAAATAAGCTTTTATGTATTATTTATAAGCTTGTTAAGTTAGTTTATGAAA
  AGG CCTGTTTGGATTGA CTTATT  AAA GC                                                                          
  ||| |||||||||||||| ||||||  ||| ||                                                                          A
  TCC GGGCAAACCTAACT GAATAA  TTT TC                                                                          
AA   G              C      TT   A  GAAGACGTTTATTTATTCCAAAATACAATCAAATATTCAAGAGTGATTGTTTTTCACATAGAAGTATTCGACAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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