SE2020429

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5631
  • Medicago truncatula
  • SE2020429
  • Mutator
  • M37
  • MtChr2:930707-930919
  • TTAACTTTA
  • AGGGTCTTGCTAACAAGTACCCTTAGGGCACTTGTTAAGAATTCTAAAATAGAAATAATTGGTTAGTTTTATGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAACTTT    T T           AC  ----------       -A           T      AT      ----AA    TTA   TT          AATTACTTTTTC
        AGGG C TGCTAACAAGT  CC          TTAGGGC  CTTGTTAAGAA TCTAAA  AGAAAT      TTGG   GTT  ATGTAGAAAA            
        |||| | |||||||||||  ||          |||||||  ||||||||||| ||||||  ||||||      ||||   |||  ||||||||||            A
        TCCC G ACGATTGTTTA  GG          GATCCTG  GAACAATTCTT AGATTT  TCTTTA      AACC   TAA  TACGTAAGTT            
TTTTCAAT    T T           AC  TAGATTACAT       AA           C      CT      AAACAG    --C   -C          GTGTAACTTTGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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