SE2020454

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5656
  • Medicago truncatula
  • SE2020454
  • Mutator
  • M2
  • MtChr5:16571918-16572121
  • AATTTACTA
  • GAGCAATGTTATTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
 AATTTACTA   C    T      AATAT    TTGGTTGACAACCACATTGACAACCATATTTTTACAAAGAAAAGTATGTGTTGGCACAAAAACCAAAGCA
          GAG AATG TATTTG     CAAT                                                                      
          ||| |||| ||||||     ||||                                                                      A
          CTC TTAC ATAAAC     TGTT                                                                      
TATCATTTAA   T    T      ----A    GGTAAAGAATTGTTGAAAACACTGTTGAAAGAGAAAGTATGAGTGTAATATAAAAATGAAAGAAAGAGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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