SE2030463

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5665
  • Medicago truncatula
  • SE2030463
  • hAT
  • Hat2
  • MtChr2:19239881-19240077
  • GTTGTCAT
  • TGTCATCTATGAAGCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
GT  T  -            -----   CACTCCTCGGATTAGGCGTGTCCCAGTGTCGGACACGTGTCGTGTCCGATACCGACATGACACCGACACTTGTA
  TG CA TCTATGAAGCAC     GGA                                                                          
  || || ||||||||||||     |||                                                                           
  AC GT GGATACTTCGTG     GCC                                                                          
 T  T  T            CCTAT   TGTGCCTGTGGCCTGTGCTGTGTCTGTGCGGCTGTGTTGATTATTAAACTTTTATAGTGTAATAGACCACATTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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