SE2020470

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5672
  • Medicago truncatula
  • SE2020470
  • Mutator
  • M105
  • AC233070:36729-36926
  • TTTATTTAA
  • AAGAAAATTGTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTATTT    AAA      TTCTA  A  AAAAA    ---AC       A      -   T   T  C  TAAC             C   AA   ATAA
       AAGA   TTGTTT     AC TC     TTTC     AACACAT GAAAAT ACT AAA AC CC    GGTAGTTAACTAC GCT  TTT    
       ||||   ||||||     || ||     ||||     ||||||| |||||| ||| ||| || ||    ||||||||||||| |||  |||    C
       TTCT   AACGAA     TG AG     AAAG     TTGTGTA CTTTTA TGA TTT TG GG    CCATCAATTGATG CGG  AAA    
AATTTAT    AAC      CAAAC  A  GTTAC    GATTT       -      C   T   T  A  --CA             A   CC   AGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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