SE2010479

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5681
  • Medicago truncatula
  • SE2010479
  • Tc1/Mariner
  • St24
  • MtChr7:25054022-25054259
  • TA
  • TACTCCCTCCGTCCCAAATTGTATGACGTTTTGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
                         A            T    --  ----      ----------- GAAATGTAATTAATATTGTGTGATATGGAAAAGATAAATGAAGGAATTGAAAGAAGAGA
TACTCCCTCCGTCCCAAATTGTATG CGTTTTGGACAT TCAC  AC    ATATTA           A                                                           
||||||||||||||||||||||||| |||||||||||| ||||  ||    ||||||           |                                                            
ATGAGGGAGGCAGGGTTTAACATAC GTGAAATCTTTT TTAT  AC    TTTAAC           T                                                           
                         A            -    AA  AGAG      ATACAGTGAAA GTTATGGTTACTTTTTAATTACAATGAAAAGGATAATATAGGAATTGATAAATAATGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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