SE2020486

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5688
  • Medicago truncatula
  • SE2020486
  • Mutator
  • M2
  • MtChr3:43163766-43163967
  • CATATATAA
  • TATATAAGAGGAGTGTTATTTGAACAACCATTTGGTTGACAACTTTTAGGACAACCATAATTTATA

Secondary structure and sequence

TSD    TIR
5'



3' 
CA      -A        T          A      GGT           AG      ---------    A      AAGAAAAAA  --  TATTTGCACGAAAAC
  TATATA  GAGGAGTG TATTTGAACA CCATTT   TGACAACTTTT  GACAAC         CATA TTTATA         TT  GG               
  ||||||  |||||||| |||||||||| ||||||   |||||||||||  ||||||         |||| ||||||         ||  ||               C
  ATATAT  CTCTTTAC ATAAACTTGT GGTAAA   ACTGTTGAAAA  CTGTTG         GTAT GAGTGT         TG  AT               
 A      AC        T          A      -AT           CA      AAAGAGAGA    -      AATGAAAAA  AA  AGAGAGATAACGAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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