SE2020487

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5689
  • Medicago truncatula
  • SE2020487
  • Mutator
  • M49
  • MtChr2:2102694-2102884
  • TAAAAAAAA
  • AGGAGAAAACTTAGGTACAATTTCTTAGGTGCTTTTCGTATGGTTCTTAACTAAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAAAAA                               C                       TTCAC    A   CCTC  -ATCCAT      C
        AGGAGAAAACTTAGGTACAATTTCTTAGGTG TTTTCGTATGGTTCTTAACTAAA     CATG TTT    GA       AATTTT 
        ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     |||| |||    ||       |||||| T
        TCCTCTTTTGAATCCATGTTAAGGAATCCAC AAAAGCATACCAAGAATTGATTT     GTAT AAA    CT       TTGAAA 
AAAAAAAA                               A                       -TTAT    A   AAAC  ATATTGT      C
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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