SE2020498

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5700
  • Medicago truncatula
  • SE2020498
  • Mutator
  • M7
  • MtChr3:39936274-39936467
  • AAAAAAATT
  • GGGTCTTGTTAACAAGTGCCCTAAGGGCATTGTTTAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAAAAATTA   TCT              C                 GAACCCACAAAAA   -      TCTTGAAAATACAAGTCAAACATTTGTTAAAGT
          GGG   TGTTAACAAGTGCC TAAGGGCATTGTTTAAG             GAA ATTATG                                 
          |||   |||||||||||||| |||||||||||||||||             ||| ||||||                                  
          CCT   ACAATTGTTCACGG ATTCCCGTAACAAATTC             TAT TTTTCA                                 
 ATTAAAAAA   TTT              A                 ------------G   A      TCGTTGAAAACGTAACCTTTAACATGCCAATAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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