SE2020499

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5701
  • Medicago truncatula
  • SE2020499
  • Mutator
  • M7
  • MtChr8:23389643-23389836
  • TTAATATAA
  • TAAGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAATA      TCTTG             C                 GAACCCACAAAAAGAA      T   GAAAAT CAAATCAATCACTTGTTAAAGTCATAA
      TAAGGG     GTTAACAAGTGCC TAAGGGCATTGTTTAAG                ATTATG CTT      A                           
      ||||||     ||||||||||||| |||||||||||||||||                |||||| |||      |                           T
      ATTCCT     CAATTGTTCACGG ATTCCCGTAACAAATTC                TATATT TTC      A                           
AATATA      -TTTA             T                 ---------------G      -   ------ TCGTTGAAAATGTAACTTTTAACATGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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