SE2010505

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5707
  • Medicago truncatula
  • SE2010505
  • Tc1/Mariner
  • St4
  • MtChr1:10081920-10082068
  • TA
  • TACTCCCTCCGTTTCAAAATATAAGCAAAATTTACTTTTTAGATTCATTCATTTAATGATGTATGTGGTACATATTATGAACCATATACATCATTAAATGAATGAACCTAAAAAGTGAATTTTGCTTATATTTTGAAACGGAGGGAGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
                                          A                          A   A
TACTCCCTCCGTTTCAAAATATAAGCAAAATTTACTTTTTAG TTCATTCATTTAATGATGTATGTGGT CAT 
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| T
ATGAGGGAGGCAAAGTTTTATATTCGTTTTAAGTGAAAAATC AAGTAAGTAAATTACTACATATACCA GTA 
                                          C                          A   T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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