SE2020515

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5717
  • Medicago truncatula
  • SE2020515
  • Mutator
  • M2
  • MtChr3:34283971-34284169
  • AATTTATAT
  • TGAGAAATGATATTTTAACATCCATTTTTTAACAACTTTTGTGACAA

Secondary structure and sequence

TSD    TIR
5'



3' 
AATTTATA    A           A   T   T               -       CTCTCTCTCA   TCTTATTGTACTTTTATTCTCTCTCTTCATTTTTC
        TGAG AATGATATTTT ACA CCA TTTTTAACAACTTTT GTGACAA          TAC                                   
        |||| ||||||||||| ||| ||| ||||||||||||||| |||||||          |||                                    
        ACTC TTACTATAAAA TGT GGT AAAGGTTGTTGAAAA CACTGTT          AAA                                   
TATATTTA    C           C   T   T               T       --------AA   AGGAGAGAAAAGTAACCTGTTATTGTTATCTCTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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