SE2020516

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5718
  • Medicago truncatula
  • SE2020516
  • Mutator
  • M76
  • MtChr8:12389125-12389332
  • TTTTTTTAT
  • GGGAAATGCTAACCGATGCCCCCGTGGCACTGGTTAATGATAATAAAAAGGGAAATTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTTTTAT   AA          A        T    CT      TG   A            TT  ---AT       --- TT   TTGAAAATTGTTTAATTAA
         GGG  ATGCTAACCG TGCCCCCG GGCA  GGTTAA  ATA TAAAAAGGGAAA  AT     GTTAATT   A  GCA                   
         |||  |||||||||| |||||||| ||||  ||||||  ||| ||||||||||||  ||     |||||||   |  |||                   T
         CCC  TACGATTGGC ACGGGGGC CCGT  CCAATT  TAT GTTTTTTTTTTT  TA     GGTATTT   T  TCA                   
TATTTTTTT   AG          C        C    AC      CG   -            TT  AGAAT       TCC --   AAACAACTGAATAAATACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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