SE2020519

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5721
  • Medicago truncatula
  • SE2020519
  • Mutator
  • M2
  • MtChr8:14267205-14267405
  • TTTCTATAA
  • AAGAGAAATGATATTTGTACAACCACTTTTTGACAACTTTTGAAACAACC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTCTAT     AAA                 CT     -     T    AA      CTCTCTCTCAT  TCACATGTTTTTTTATTATCCCTCTTTCTCTTTCT
       AAGAG   TGATATTTGTACAACCA  TTTTG ACAAC TTTG  ACAACC           AC                                   
       |||||   |||||||||||||||||  ||||| ||||| ||||  ||||||           ||                                   C
       TTCTC   ACTATAAACATGTTGGT  AAAAC TGTTG AAAC  TGTTGG           GA                                   
AATATCT     CTC                 -T     A     T    AC      ----------T  AAAAGAAATAAGAATAACCTGTTTTTGTTATCTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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