SE2020541

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5743
  • Medicago truncatula
  • SE2020541
  • Mutator
  • M18
  • MtChr4:19922811-19923009
  • TTAAAATTA
  • AGAGGAATGCTAGCAACACTCACTTTTCAACACTCTAACACTCTTTTATTGGATGAAGTCAATGTATG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAAATT    GA               A     C        --------AA     T        ATG      ATG    --  -     ATTTTGTGTGGG
        AGAG  ATGCTAGCAACACTC CTTTT AACACTCT          CACTC TTTATTGG   AAGTCA   TATG  AC CCACC            
        ||||  ||||||||||||||| ||||| ||||||||          ||||| ||||||||   ||||||   ||||  || |||||             
        TCTC  TACGATCGTTGTGAG GAAAA TTGTGGGA          GTGAG GAATAACC   TTTAGT   ATAC  AG TGTGA            
ATTAAAAT    AT               A     C        GAGATTATGA     T        AAA      --A    CC  A     AACTTATAACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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