SE2020592

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5794
  • Medicago truncatula
  • SE2020592
  • Mutator
  • M72
  • MtChr6:19001613-19001806
  • GAATATTAT
  • AATATTATGATAATTTCTCTTCTCCCATCTGGTTTTGCTCATTCCCGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
 G      A        T               GT             G  --      G   ATC    TTTAACTCACACATGTGTATTTTCAGCGTGA
  AATATT TGATAATT CTCTTCTCCCATCTG  TTTGCTCATTCCC TT  AAAATA ACG   GTGA                               
  |||||| |||||||| |||||||||||||||  ||||||||||||| ||  |||||| |||   ||||                                
  TTATAA GCTATTAA GAGAAGAGGGTAGAC  AAATGAGTAAGGG GA  TGCACT CAA   TTGA                               
TA      -        C               AA             A  GA      -   ---    GTGCGACTTTTTATGTGTATGCACTCAATTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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