SE2010600

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5802
  • Medicago truncatula
  • SE2010600
  • Tc1/Mariner
  • St6
  • MtChr8:9231628-9231924
  • TA
  • TACTCCCTCCGTCCCATAATAACTGAGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
                 AA          ATTT    AAAAATATTGTCCCAGAAAAATTGACCCATTTCACTTTTCAATACAATATTAATTACTTTTTTCCAATTATAACACTAATTAATACTACTTTCACCACTCCCAATTCAATATA
TACTCCCTCCGTCCCAT  TAACTGAGTC    GCAA                                                                                                                 
|||||||||||||||||  ||||||||||    ||||                                                                                                                  
ATGAGGGAGGCAGGGTA  ATTGACTCGG    AACT                                                                                                                 
                 AA          ---G    GAGTAAAGTGTGAATAATTCTTTTTCACATATTCACTTTCTCTCTCTTTTTACCAAAACTCACAGGAATAGTTGATAACCACGTAAGAAAAAATAGTATTTACGTTTCATCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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