SE2020601

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5803
  • Medicago truncatula
  • SE2020601
  • Mutator
  • M12
  • MtChr7:32875684-32875881
  • TAAAAAATA
  • GG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAAAATA  CAAAA               TTATT                     CA A   C ACCATCAGATTTTTTTTATTTTGAACAAAAATGG
         GG     GTTATGGTGCATAAG     TCCTTATGCACCGTGCATAAA  C TCA A                                  
         ||     |||||||||||||||     |||||||||||||||||||||  | ||| |                                   
         CC     CAATACCACGTATTC     AGGAATACGTGGCACGTATTT  G TTG T                                  
ATAAAAAAA  CTCAC               -CTTT                     AG G   - ATTAACGAAGGATGTGGGGGTTTCACTCGGTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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