SE2020602

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5804
  • Medicago truncatula
  • SE2020602
  • Mutator
  • M23
  • MtChr1:5902123-5902299
  • GTATAAATG
  • ATGGGAAAATACTTGGGTGACATAGAGTTTGATGACATTGGTAACATTGGCCAATCACAATGCCACAATGCTTGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
 GTATAA     AA                      T            A                                 TTTCTC
       ATGGG  AATACTTGGGTGACATAGAGTT GATGACATTGGT ACATTGGCCAATCACAATGCCACAATGCTTGTG      
       |||||  |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||      T
       TGCCC  TTGTGAACCCACTGTATCTCAA CTACTGTAACCA TGTAACTGGTTAGTGTTACGGTGTTACGAACAC      
GTAAATA     -A                      C            C                                 TTTCTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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