SE2050604

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5806
  • Medicago truncatula
  • SE2050604
  • PIF/harbinger
  • To3
  • MtChr5:9626282-9626445
  • TTA
  • AGAGTGTGTTTGGATGGGGGAATGTTTCGAGGGAATGTAATGTTTTGAGGGAATTCAACTACTTTGAGGTGAGTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT                           C       T                                        AAAC
  AGAGTGTGTTTGGATGGGGGAATGTTT GAGGGAA GTAATGTTTTGAGGGAATTCAACTACTTTGAGGTGAGTTC    
  ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||     
  TCTCACACAAACCTACCCCCTTATAAA CTCCCTT CATTACAAAACTCCCTTAAGTTGATGAAATTCCACTTAAG    
AT                           A       T                                        ATAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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