SE2010631

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5833
  • Medicago truncatula
  • SE2010631
  • Tc1/Mariner
  • St6
  • MtChr5:5219975-5220270
  • TA
  • TACTCCGTCCGTCCCATAATAACTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
      G         TAA   C          -  AATAAAAAAGTGTCCCAAAATAACTGTGTCATTTCACTTTCCAATACAGTATTAATTACTTTTTTCAAATTATAACTCTAATTAATATTACTTTCACCACTTCCAATACAAT
TACTCC TCCGTCCCA   TAA TGAGACATTT TT                                                                                                                
|||||| |||||||||   ||| |||||||||| ||                                                                                                                A
ATGAGG AGGCAGGGT   ATT ACTTGGTAAA GA                                                                                                                
      G         TAA   A          C  GTAATGTGTGAATAATTCTTTTTATATAATCACTTCCTCTCTCTTTTTACCAAAACTCACAGAAACAATTCATAACCAAGTAAGAAGAAATAGTATTTACATTTCATCTTAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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