SE2010640

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5842
  • Medicago truncatula
  • SE2010640
  • Tc1/Mariner
  • St36
  • MtChr8:22154389-22154689
  • TA
  • TACTCCCTCCGTCCCTTAATAAGTGACCTAT

Secondary structure and sequence

TSD    TIR
5'



3' 
                T                    AT  CACACAGATTAAGAAAAGTGTAAAGATGAAAGAAAGAGAGTGATACTTTTACTGAGTTGCCCTTGTCATTATTTTGAAACTTTTTCACTTTTAAGCAATGATTACTTTCT
TACTCCCTCCGTCCCT AATAAGTGACCTATTTGACC  TT                                                                                                              
|||||||||||||||| ||||||||||||||||||||  ||                                                                                                              T
ATGAGGGAGGCAGGGA TTATTCACTGGATAAACATT  TT                                                                                                              
                C                    --  TTATAAACAGGGTGTTATGAACTGGAAGAGTCTAAAGATTCGTTTTAAACTGTCTAAATGGGGAATATTTATGAAAAACACCAGGGGTACAATTTCAAACATCACCTTGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3