SE2020658

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5860
  • Medicago truncatula
  • SE2020658
  • Mutator
  • M72
  • MtChr5:9690116-9690307
  • TTGCCTTAC
  • GATAATTGCTCTTCTCCCATCTGGTTTTGCTCATTCCCGT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGCCTTAC  T     C        C   T GT          C    C  -   GTAGA   TGAGTTAACCCACACAAGTGTATTTTCAGATGAGT
         GA AATTG TCTTCTCC ATC G  TTTGCTCATT CCGT AA ATA     GCG                                   
         || ||||| |||||||| ||| |  |||||||||| |||| || |||     |||                                   T
         CT TTAAC AGAAGAGG TAG C  AAACGAGTAA GGCG AG TGC     ACT                                   
CATTCCGTT  C     A        A   T AA          A    -  A   -----   AAATTGAGTGCGACTTTTTATGTGGATGCACTCAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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