SE2020684

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5886
  • Medicago truncatula
  • SE2020684
  • Mutator
  • M7
  • MtChr5:36970281-36970472
  • TTTATGTAA
  • AAGGGAAATGCTAACAACTGCTCTCAGGGCATTGTTTAAGTATCTAAAAGTAGTAATATTTAATTGAAAATTATGCAGTTATGAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTATGT     AAA         C      C               -T     A   T  T  TA   -AA        T   C     TGA  TTT
       AAGGG   TGCTAACAA TGCTCT AGGGCATTGTTTAAG  ATCTA AAG AG AA  TTT   TTGAAAAT ATG AGTTA   AT   
       |||||   ||||||||| |||||| |||||||||||||||  ||||| ||| || ||  |||   |||||||| ||| |||||   ||   A
       TTCCC   ACGATTGTT ACGGGA TCTTGTAACAAATTC  TGGAT TTT TC TT  AAA   AACTTTTA TAT TCAGT   TG   
AATTTAT     AGA         C      T               CT     G   T  -  TG   CAG        -   -     TTG  TAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3